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Course Log

Homework_2020Bioinformatics

Mapping

YajinMo_Homework_2020/09/28 Task 01 将 THA2.fa map 到 BowtieIndex/YeastGenome 上,得到 THA2.sam; 将 e_coli_500.fq map 到 bowtie-src/indexes/e_coli 上,得到 e_coli_500.sam 将作业文件和比对数据以及其他需要文件拷贝至个人文件夹下: 1...

Homework_2020Bioinformatics

Blast & Conservation Analysis

YajinMo_Homework_2020/09/21 Task 01 请使用网页版的 blastp, 将上面的蛋白序列只与 mouse protein database 进行比对, 设置输出结果最多保留10个, E 值最大为 0.5。将操作过程和结果截图。 Y.Mo: 利用NCBI提供的在线Blast工具[1],对Target蛋白序列进行blastp分析 (Figure 1)...

Preperation

Coding Environment & Languages

Bioinformatics_2020Fall requires for basic commmonds of R and Linux as well as set up of coding environment for the convinience of integrated software packages (e.g. Docker & Singularity), and ...

Data Representation - Integer

「数据表示」整数

Integers, or whole number from elemental mathematics, are the most common and fundamental numbers used in the computers. It’s represented as fixed-point numbers, contrast to floating-point number...

My Spacemacs Workflow

From Vim to Spacemacs

Emacs tend to provide a good support for functional programming languages. Indeed, many FP language community exclusively use Emacs and give only first-party IDE supports to Emacs, such as Coq, Agd...