Frontiers in Single Cell Genomics - CSHAsia
Oct 27,2020 - Oct 29, 2020
About this event
Frontiers in Single Cell Genomics Suzhou, China
October 27-29, 2020 Virtual
Abstract deadline: September 15, 2020
Organized by:
Fuchou Tang, Peking University
Muzlifah Haniffa,Newcastle University
Guo-Cheng Yuan, Harvard University
Gavin Kelsey, The Babraham Institute
Major Topics:
- Technology development
- Developmental Biology
- Cancer Biology
- Computational biology
- Single cell epigenomics
- Single cell transcriptional profiling
- Single cell DNA analysis
- Single cell imaging
- Next-generation sequencing
Keynote Speakers:
Xiaoliang Sunney, Peking University
Stephen Quake, Stanford University
Invited Speakers:
Fan Bai, Peking university
Omer Bayraktar, Wellcome Sanger Institute
Long Cai, Caltech
Jean Fan, Johns Hopkins University
Bertie Gottgens, University of Cambridge
Guoji Guo, Zhejiang University School of Medicine
Muzlifah Haniffa, Newcastle University
Aibin He, Peking University
Yanyi Huang, Peking Universtiy
Naihe Jing, Shanghai Institutes for Biological Sciences
Gavin Kelsey, The Babraham Institute
Shalin Naik, The Walter and Eliza Hall Institute of Medical Research
Woong-Yang Park, Samsung Medical Center
Shyam Prabhakar, Genome Institute of Singapore
Ansuman Satpathy, Stanford University
Jay Shin, RIKEN Center for Integrative Medical Sciences
Alison Simmons, University of Oxford
Oliver Stegle, European Bioinformatics Institute (EMBL-EBI)
Fuchou Tang, Peking University
Celine Vallot, Institut Curie
Alexandra-Chloe Villani, Massachusetts General Hospital, Harvard Medical School
Catherine CL Wong, Center for Life Sciences
Guo-Cheng Yuan, Harvard University
Zemin Zhang, Peking University
Session 1 (Oct 27, 8am-1pm)
Speakers
Aibin He
Peking University
Session Chair
Unravelling immune and cellular responses associated with acute COVID-19 infection, symptoms and lethality at single-cell resolution
Alexandra-Chloe Villani
8:00 am - 8:40 am
Single-cell analysis of Asian diversity and cancer cohorts
Shyam Prabhakar
8:40 am - 9:20 am
Immune microenvironment in microsatellite-instable colorectal cancer
Woong-Yang Park
9:20 am - 10:00 am
Break
10:00 am - 10:20 am
Single-cell transcriptomic analysis defines the interplay between tumor cells, virus infection, and the microenvironment in nasopharyngeal carcinoma
Fan Bai
10:20 am - 11:00 am
Abstract title not available
Ansuman Satpathy
11:00 am - 11:40 am
Molecular architecture of lineage specification and tissue organization in early mouse embryo
Naihe Jing
11:40 am - 12:20 pm
Building the Human Cell Regulatory Atlas from the 5’-end
Jay Shin
12:20 pm - 1:00 pm
Session 2 (Oct 27, 2pm-6pm)
Speakers
Zemin Zhang
Peking University
Session Chair
Subsessions
Potent neutralizing antibodies against SARS-CoV-2 identified by high-throughput single-cell sequencing of convalescent patients’ B cells
Xiaoliang Sunney Xie
2:00 pm - 3:00 pm
Mapping human tissue architecture using spatial genomics
Omer Bayraktar
3:00 pm - 3:40 pm
Break
3:40 pm - 4:00 pm
Mapping early organogenesis at single cell resolution
Bertie Gottgens
4:00 pm - 4:40 pm
Tracking the dynamics of transcriptomes and epigenomes in tumor cells―Response and resistance to cancer therapies
Celine Vallot
4:40 pm - 5:20 pm
Investigating influences of maternal factors on the egg epigenome with single-cell epigenomics
Gavin Kelsey
5:20 pm - 6:00 pm
Session 3 (Oct 28, 8am-1pm)
Speakers
Fan Bai
Peking university
Session Chair
Subsessions
Spatial transcriptomics analysis
Guo-Cheng Yuan
8:00 am - 8:40 am
Spatial transcriptome profiling by MERFISH and RNA velocity in situ analysis reveals cell cycle-dependent gene expression
Jean Fan
8:40 am - 9:20 am
Spatial genomics―In situ transcriptome profiling by RNA seqFISH+
Long Cai
9:20 am - 10:00 am
Break
10:00 am - 10:20 am
Single cell whole genome sequencing reveals low-frequency somatic copy number alterations
Yanyi Huang
10:20 am - 11:00 am
Mapping mammalian cell landscapes by single cell mRNA-seq
Guoji Guo
11:00 am - 11:40 am
Decoding human embryonic development by single-cell omics sequencing approach
Fuchou Tang
11:40 am - 12:20 pm
Clonal biology
Shalin Naik
12:20 pm - 1:00 pm
Session 4 (Oct 28, 2pm-6pm)
Speakers
Yanyi Huang
Peking University
Session Chair
Subsessions
Single Cell Proteome (SCP) using Glass-Oil-Air-Droplet (GOAD) nano chip device and its application on embryo development
Catherine CL Wong
2:00 pm - 2:40 pm
KEYNOTE
Stephen Quake
2:40 pm - 3:40 pm
Break
3:40 pm - 4:00 pm
Abstract title not available
Oliver Stegle
4:00 pm - 4:40 pm
Decoding the developing human immune system
Muzlifah Haniffa
4:40 pm - 5:20 pm
Cellular immune pathology of ulcerative colitis
Alison Simmons
5:20 pm - 6:00 pm
Session 5 (Oct 29, 8am-11:40am)
Speakers
Yanyi Huang
Peking University
Session Chair
Subsessions
Joint single-cell detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions
Aibin He
8:00 am - 8:40 am
Pan-cancer single cell analysis of tumor-infiltrating immune cells
Zemin Zhang
8:40 am - 9:20 am
Spatial transcriptome and integrative computational analysis
Guangdun Peng
9:20 am - 9:50 am
Break
9:50 am - 10:10 am
The transcriptional atlas of blood cells and beyond
Ping Zhu
10:10 am - 10:40 am
scKinetics leverages supervised methods to recover noise corrupted biological variations from single-cell data
Xin Zou
10:40 am - 11:10 am
Uncover the hidden complexities of biology with single cell and spatial solutions
Mike Stubbington
11:10 am - 11:40 am